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VKC Notes · Reaction mechanisms · Civil Services P-II · IFoS P-II

2.7 Methods of Studying Reaction Mechanisms: Isotopes, Crossover, Trapping, Kinetic Isotope Effect

★★★ 2021–2025: 15 parts, 100 marks (Civil Services 6 parts, 50 marks; IFoS 9 parts, 50 marks). Asked every year: a kH/kD value to interpret, a labelling or crossover design, or kinetic against thermodynamic enolates.

Syllabus lines. Civil Services P-II: “General methods (both kinetic and non-kinetic) of study of mechanism of organic reactions: isotopic method, cross-over experiment, intermediate trapping, stereochemistry; energy of activation; thermodynamic control and kinetic control of reactions.” IFoS P-II: the same, “illustrated by examples”, with “energy diagrams of simple organic reactions: transition states and intermediates”. Rearrangement mechanisms: 2.6; pericyclic (Claisen): 8.1; carbanions: 2.3.

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CSE 2024 Q7(a) = asked there; tap to open the solved answerSN = line kept in the short notes

2.7.1 Kinetic and non-kinetic methods ★★

A mechanism is a hypothesis; each method below can disprove a proposed path, none proves one. A good answer names the method, the experiment, the observation and what it rules out.SN

MethodThe experimentWhat it tells
Products, by-productsidentify all products and their ratiowhich bonds broke; any mechanism must give them all
Isotopic labelling²H, ¹³C, ¹⁴C, ¹⁸O at one position; find it in the product (MS, NMR, counting)which bond breaks; where an atom goes
Crossovertwo differently labelled substrates react togetherintra- vs intermolecular
Intermediatesisolate, detect (NMR, ESR, UV) or trapstepwise path and its species
Stereochemistrychiral or geometrically defined substrateinversion, retention, syn or anti, racemisation
Kinetics (rate law, Ea, ΔS‡)vary concentrations, temperaturemolecularity of the slow step
Kinetic isotope effectcompare kH and kDis the C–H bond broken in the slow step?

2.7.2 Isotopic labelling ★★★

  • Which C–O bond breaks in ester hydrolysis? Ethyl propanoate labelled in the alkoxy oxygen, EtCO–¹⁸OEt, with OH⁻ gives EtCOO⁻ (no label) and Et¹⁸OH: acyl–oxygen fission (BAc2), not alkyl–oxygen.SN
  • Is the tetrahedral species a true intermediate? Label the carbonyl oxygen, stop the reaction half-way and recover the unreacted ester: it has lost ¹⁸O. Only an intermediate that lives long enough for a proton shift (making its two oxygens equivalent) and that can revert to ester explains this; a single transition state cannot IFoS 2023 Q1(b) 5m.SN
ester, C=O carries 18Oslow tetrahedral intermediateH+ shift back− H18O− recovered ester: label lostlabel exchange inunreacted ester provesa real intermediate
Fig. 2.7.1 18O exchange in basic ester hydrolysis (Bender).
Draw it in 60 s: ester with C=18O; HO− arrow to C; C=O arrow to O; tetrahedral 18O−/OH; proton swap; O− lone pair arrow back to C–O, C–18OH bond arrow to O; ester without label.
  • R–COO⁻ + Br–CN → R–CN + Br⁻ + CO₂: use R–¹⁴COO⁻. The nitrile is radioactive and the CO₂ is not: the nitrile carbon is the old carboxyl carbon; only N comes from BrCN, whose carbon leaves as CO₂. Path: acyl cyanate → acyl isocyanate → four-membered ring → R–C≡N + CO₂ (the reverse test, Br¹⁴CN, gives ¹⁴CO₂) CSE 2021 Q1(a) 10m IFoS 2022 Q1(c) 5m.SN
R–14COO− (R = CH3)BrCN− Br− acyl cyanaterearranges acyl isocyanate250 °C four-membered ring + R–14C≡N, radioactiveCO2 inactiveCO2 carbon came from BrCN;the CN group is nottransferred as a unit
Fig. 2.7.2 Where the nitrile carbon comes from.
Draw it in 60 s: R–14COO− lone pair to the C of BrCN, C–Br arrow to Br; acyl cyanate → isocyanate; four-ring; two arrows split it into R–14C≡N and CO2.
  • Benzyne (Roberts): chlorobenzene with ¹⁴C at C-1 and KNH₂ gives aniline with the NH₂ half on the labelled carbon and half on its neighbour. Direct displacement would put it only on C-1; a symmetrical intermediate with two equivalent ends, benzyne, explains 50 : 50 (Fig. 2.7.3).SN
PhCl, C-1 = 14C− NH3, − Cl− benzyne ≈ 50 %≈ 50 % benzyne+ furan (trap)Diels–Alder 1,4-epoxy-1,4-dihydronaphthalene
Fig. 2.7.3 Benzyne: label scrambling, and trapping by furan (2.7.4).
Draw it in 60 s: PhCl with a ● at C-1; NH2− takes the ortho H; benzyne with ● at one alkyne carbon; two anilines, ● at C-1 and C-2 (50 : 50); benzyne + furan → bicyclic adduct.

2.7.3 Crossover experiments ★★★ 15 marks in 2024

  • Design: run two substrates that differ in both parts that may separate (double labelling, isotopic or by a substituent), in one flask under the same conditions. Only the two “own” products → intramolecular. Crossed products (statistically, about as much as the own ones) → the pieces separate and recombine: intermolecular.SN
  • Claisen rearrangement: heat allyl p-tolyl ether with 2-methylallyl phenyl ether: only 2-allyl-4-methylphenol and 2-(2-methylallyl)phenol form; no 2-allylphenol and no 2-(2-methylallyl)-4-methylphenol. The allyl group never leaves its ring: a concerted [3,3] shift CSE 2024 Q4(b)(i) 10m.SN
A: allyl p-tolyl ether+ B: 2-methylallyl phenyl etherheat together200 °C from A only+ from B onlycrossed products2-allylphenol and2-(2-methylallyl)-4-methylphenolNOT formed → intramolecular
Fig. 2.7.4 Crossover test for the Claisen rearrangement.
Draw it in 60 s: two ethers with different tags (ring Me; chain Me) → two phenols, each keeping its own tag; write “crossed products absent”.
  • Para-Claisen: with both ortho positions blocked (2,6-dimethylphenyl or 2-methoxy-6-methylphenyl allyl ethers) the first [3,3] shift gives a dienone that cannot tautomerise; a second [3,3] (Cope) carries the chain to the para carbon, then H⁺ shift gives the 4-allylphenol. Heated together, each ether gives only its own para product: still intramolecular. Two inversions of the allyl chain: a crotyl group arrives at para unchanged in connection IFoS 2024 Q2(a)(i) 5m.SN
  • Contrast: the Fries rearrangement of aryl esters gives some crossed products (an acylium ion is free in part); the benzidine rearrangement gives none.

2.7.4 Isolating, detecting and trapping intermediates ★★

  • Isolate it under milder conditions (N-bromoamide and isocyanate in the Hofmann reaction); detect it in situ: carbocations by ¹³C NMR in superacid (SbF₅–SO₂ClF), radicals by ESR, enols and enolates by UV/IR.SN
  • Trap it: add a reagent that reacts with the suspected species faster than anything else and gives a product of known structure. Benzyne + furan → Diels–Alder adduct; carbenes + alkene → cyclopropane (stereospecific for singlet); radicals + TEMPO; carbocations + N₃⁻ or MeOH; enolates + D₂O or Me₃SiCl (the D or SiMe₃ marks the carbon that carried the charge, 2.7.8).SN
  • H/D exchange rates report carbanion formation: the α-H of a cyclopropyl ketone exchanges ≈ 6 × 10³ times faster than that of a cyclopropenyl ketone; the cyclopropenyl anion would place 4 π electrons in a planar three-membered ring, antiaromatic, so that carbanion forms slowly IFoS 2021 Q3(a)(i) 5m.SN

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