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UPSC Civil Services (Mains)

Chemistry optional

  • 2 papers
  • 250 marks each
  • 3 h per paper
  • 5 of 8 questions, Q1 and Q5 compulsory

Paper I covers physical and inorganic chemistry.

UPSC Civil Services (Mains), Chemistry optional · 2017 · Paper I

Q7(b). Cytochromes: prosthetic group, haemoglobin, function

  • 10 marks
  • Answered
Question

Define prosthetic group in cytochromes. How do they differ from haemoglobin? What is their main function?

Answer in brief

The prosthetic group of a cytochrome is its tightly bound non-protein iron porphyrin (haem). In cytochromes the iron is six-coordinate, low spin and switches between Fe(III) and Fe(II); in haemoglobin Fe(II) is five-coordinate and binds O₂ at the sixth site. Cytochromes transfer electrons.

Key points

  • a non-protein unit, tightly (often covalently) bound to a protein, that is essential for its activity. In cytochromes it is a haem: Fe held by the four N atoms of a porphyrin ring (haem a, b or c; in cytochrome c the haem is…
  • Coordination. Cytochromes are six-coordinate: besides the four porphyrin N they have two stable axial bonds to amino-acid donors (histidine N and methionine S in cytochrome c). Haemoglobin and myoglobin are five-coordinate…
  • Oxidation state and spin. The cytochrome Fe uses the Fe³⁺/Fe²⁺ couple and is low spin in both states. In haemoglobin the Fe stays Fe(II); oxidation to Fe(III) (methaemoglobin) destroys O₂ binding.
  • Structure and binding. Haemoglobin is a tetramer and binds O₂ cooperatively; cytochromes are small single-chain proteins (or subunits of larger enzymes) and, with no vacant site, do not bind O₂ (except cytochrome c oxidase and…

The full model answer

Written out in full, as it should go in the answer booklet. The solution page with its diagrams follows it.

  1. Prosthetic group: a non-protein unit, tightly (often covalently) bound to a protein, that is essential for its activity. In cytochromes it is a haem: Fe held by the four N atoms of a porphyrin ring (haem a, b or c; in cytochrome c the haem is bonded to the protein through two thioether links from cysteine).
  2. Coordination. Cytochromes are six-coordinate: besides the four porphyrin N they have two stable axial bonds to amino-acid donors (histidine N and methionine S in cytochrome c). Haemoglobin and myoglobin are five-coordinate (one proximal histidine); the sixth site is empty or holds H₂O or O₂.
  3. Oxidation state and spin. The cytochrome Fe uses the Fe³⁺/Fe²⁺ couple and is low spin in both states. In haemoglobin the Fe stays Fe(II); oxidation to Fe(III) (methaemoglobin) destroys O₂ binding.
  4. Structure and binding. Haemoglobin is a tetramer and binds O₂ cooperatively; cytochromes are small single-chain proteins (or subunits of larger enzymes) and, with no vacant site, do not bind O₂ (except cytochrome c oxidase and P450, where the binding site is part of the catalytic centre).
  5. Main function: electron transfer. Cytochromes carry electrons along the mitochondrial respiratory chain (cytochrome b → c₁ → c → cytochrome c oxidase, which reduces O₂ to water) and in photosynthesis. The haem buried in the protein, with little change in structure between Fe(II) and Fe(III), gives fast electron transfer.

Application. the energy released as electrons pass down the cytochrome chain pumps protons across the mitochondrial membrane and drives ATP synthesis; cyanide and CO are poisons because they bind to the iron of cytochrome c oxidase.

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Model answer to Q7(b), 2017 Paper I: solution page 30
Solution page 30 of 38